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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
THCA cis rs2076028 1 rs5750662 chr22:39072472 JOSD1 chr22:39081549-39096459:- -0.15 -3.89 0.000115 Resting heart rate
THCA cis rs2076028 1 rs5750662 chr22:39072472 LOC646851 chr22:38974125-39052634:- 0.13 3.4 0.000739 Resting heart rate
THCA cis rs2076028 1 rs5750662 chr22:39072472 TOMM22 chr22:39077954-39080763:+ -0.16 -3.55 0.000423 Resting heart rate
THCA cis rs2076028 1 rs5750664 chr22:39072769 JOSD1 chr22:39081549-39096459:- -0.15 -3.89 0.000115 Resting heart rate
THCA cis rs2076028 1 rs5750664 chr22:39072769 LOC646851 chr22:38974125-39052634:- 0.13 3.4 0.000739 Resting heart rate
THCA cis rs2076028 1 rs5750664 chr22:39072769 TOMM22 chr22:39077954-39080763:+ -0.16 -3.55 0.000423 Resting heart rate
THCA cis rs2076028 1 rs5750668 chr22:39079964 JOSD1 chr22:39081549-39096459:- -0.15 -3.84 0.000138 Resting heart rate
THCA cis rs2076028 1 rs5750668 chr22:39079964 LOC646851 chr22:38974125-39052634:- 0.13 3.36 0.000836 Resting heart rate
THCA cis rs2076028 1 rs5750668 chr22:39079964 TOMM22 chr22:39077954-39080763:+ -0.16 -3.44 0.000633 Resting heart rate
THCA cis rs2076028 1 rs5750669 chr22:39080638 JOSD1 chr22:39081549-39096459:- -0.14 -3.59 0.000366 Resting heart rate
THCA cis rs2076028 1 rs5750669 chr22:39080638 LOC646851 chr22:38974125-39052634:- 0.14 3.62 0.00033 Resting heart rate
THCA cis rs2076028 1 rs5750671 chr22:39094619 LOC646851 chr22:38974125-39052634:- 0.14 3.64 0.000308 Resting heart rate
THCA cis rs2076028 1 rs5750671 chr22:39094619 TOMM22 chr22:39077954-39080763:+ -0.16 -3.45 0.000615 Resting heart rate
THCA cis rs2076028 1 rs5750672 chr22:39104168 GTPBP1 chr22:39101807-39129590:+ 0.16 3.59 0.000363 Resting heart rate
THCA cis rs2076028 1 rs5750672 chr22:39104168 JOSD1 chr22:39081549-39096459:- 0.19 5.24 2.46E-7 Resting heart rate